Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1021_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 28300555 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 468106 | 1.6540523675242411 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 127103 | 0.4491184006815414 | No Hit |
| GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT | 49072 | 0.1733958927660606 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCTACG | 66175 | 0.0 | 111.75787 | 1 |
| TCTACGG | 68955 | 0.0 | 106.85405 | 2 |
| TACGGCC | 69095 | 0.0 | 105.11572 | 4 |
| CTACGGC | 69970 | 0.0 | 105.07858 | 3 |
| CGGCCAT | 70075 | 0.0 | 103.33176 | 6 |
| ACGGCCA | 71380 | 0.0 | 101.47982 | 5 |
| GCCATAC | 73645 | 0.0 | 97.62864 | 8 |
| GGCCATA | 77015 | 0.0 | 94.19341 | 7 |
| CCATACC | 77795 | 0.0 | 92.09023 | 9 |
| CGACTCT | 27840 | 0.0 | 67.83829 | 1 |
| TCACGAC | 6020 | 0.0 | 59.290222 | 4 |
| TTCACGA | 6230 | 0.0 | 57.666744 | 3 |
| CTTAGCG | 32495 | 0.0 | 57.595863 | 6 |
| TTAGCGG | 32700 | 0.0 | 57.376892 | 7 |
| TAGCGGT | 33085 | 0.0 | 56.49585 | 8 |
| AGCGGTG | 33030 | 0.0 | 56.430767 | 9 |
| GTTCACG | 6555 | 0.0 | 53.91642 | 2 |
| CACGACG | 11595 | 0.0 | 53.70625 | 1 |
| CGCGAAT | 6945 | 0.0 | 53.131462 | 106-107 |
| GCGACCT | 10430 | 0.0 | 52.14393 | 2 |