Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1012_2.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26629350 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGG | 112365 | 0.42195922919635664 | No Hit |
| TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 59530 | 0.22355033074408498 | No Hit |
| TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 46993 | 0.1764706986839709 | No Hit |
| ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 43974 | 0.1651335838088425 | No Hit |
| GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA | 37116 | 0.13938004495040246 | No Hit |
| TCCTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGC | 36135 | 0.13569613978561249 | No Hit |
| CTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGCAC | 35434 | 0.1330637060236168 | No Hit |
| ACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGG | 31058 | 0.1166307100999461 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTTATCG | 4785 | 0.0 | 58.335358 | 3 |
| TTATCGG | 5245 | 0.0 | 54.222004 | 4 |
| CGGAATT | 5270 | 0.0 | 53.286434 | 8 |
| CGTTATC | 4840 | 0.0 | 51.886204 | 2 |
| TCGGAAT | 5615 | 0.0 | 50.845535 | 7 |
| GATAGTC | 40455 | 0.0 | 50.177277 | 5 |
| TTACCCG | 6965 | 0.0 | 48.217667 | 6 |
| TCGTTAT | 4825 | 0.0 | 47.56473 | 1 |
| CGACCTG | 10245 | 0.0 | 46.654778 | 8 |
| TACCCGC | 7325 | 0.0 | 45.84448 | 7 |
| AGATAGT | 44525 | 0.0 | 45.723064 | 4 |
| CTAGATA | 40485 | 0.0 | 45.720154 | 2 |
| CGGACTA | 1950 | 0.0 | 45.629833 | 2 |
| ATAGTCA | 45310 | 0.0 | 45.37568 | 6 |
| TAGATAG | 44675 | 0.0 | 44.941914 | 3 |
| TAGTCAA | 46680 | 0.0 | 43.890255 | 7 |
| GCGTACG | 2665 | 0.0 | 43.71718 | 1 |
| TTCCGAC | 11460 | 0.0 | 42.533916 | 5 |
| CCCGGTA | 5380 | 0.0 | 42.300312 | 9 |
| GTCGTTT | 3530 | 0.0 | 42.292343 | 1 |