Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1015_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 13216614 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 106305 | 0.8043285519271427 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 23606 | 0.1786085301424404 | No Hit |
| CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 14213 | 0.1075388900666994 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCTACG | 16050 | 0.0 | 109.33656 | 1 |
| TCTACGG | 16785 | 0.0 | 104.30519 | 2 |
| TACGGCC | 17190 | 0.0 | 101.16807 | 4 |
| CTACGGC | 17310 | 0.0 | 100.90546 | 3 |
| CGGCCAT | 17750 | 0.0 | 97.97073 | 6 |
| ACGGCCA | 18420 | 0.0 | 94.34841 | 5 |
| GCCATAC | 18880 | 0.0 | 91.35997 | 8 |
| GGCCATA | 20445 | 0.0 | 85.14127 | 7 |
| CCATACC | 20920 | 0.0 | 81.83681 | 9 |
| TCACGAC | 2365 | 0.0 | 54.341557 | 4 |
| CACGACG | 4965 | 0.0 | 53.769684 | 1 |
| CGCGTAT | 2055 | 0.0 | 50.871223 | 110-111 |
| TTCACGA | 2640 | 0.0 | 49.78736 | 3 |
| AATCGCG | 2100 | 0.0 | 49.352154 | 106-107 |
| ACGCCGT | 2560 | 0.0 | 48.675667 | 110-111 |
| TCGCGTA | 2115 | 0.0 | 48.152576 | 108-109 |
| ATCGCGT | 2160 | 0.0 | 47.565422 | 108-109 |
| GTTCACG | 2715 | 0.0 | 47.551365 | 2 |
| TCGGACG | 3590 | 0.0 | 47.3918 | 106-107 |
| ATCCCGT | 5545 | 0.0 | 47.212917 | 108-109 |