Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1012_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26629350 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 281288 | 1.056308171247139 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 128085 | 0.48099183795323586 | No Hit |
| GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT | 44646 | 0.1676571151755488 | No Hit |
| AGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGAT | 43076 | 0.16176136480988082 | No Hit |
| AAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAA | 43033 | 0.1615998888444517 | No Hit |
| GGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCT | 33338 | 0.12519269152269957 | No Hit |
| ATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGG | 29883 | 0.11221828546322009 | No Hit |
| GGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAGAAG | 28249 | 0.10608219877691345 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCTACG | 38235 | 0.0 | 110.41577 | 1 |
| TCTACGG | 39445 | 0.0 | 106.62884 | 2 |
| TACGGCC | 40145 | 0.0 | 104.0129 | 4 |
| CTACGGC | 40455 | 0.0 | 103.89455 | 3 |
| CGGCCAT | 41925 | 0.0 | 99.24329 | 6 |
| ACGGCCA | 43990 | 0.0 | 94.66885 | 5 |
| GCCATAC | 43705 | 0.0 | 94.47555 | 8 |
| GGCCATA | 46575 | 0.0 | 89.42157 | 7 |
| CCATACC | 48635 | 0.0 | 84.7667 | 9 |
| CTTAGCG | 30270 | 0.0 | 60.169304 | 6 |
| TTAGCGG | 30445 | 0.0 | 59.592426 | 7 |
| AGCGGTG | 31755 | 0.0 | 56.54371 | 9 |
| TAGCGGT | 34070 | 0.0 | 53.06169 | 8 |
| TCGCGTA | 4065 | 0.0 | 53.057312 | 108-109 |
| CGCGTAT | 4320 | 0.0 | 51.451797 | 110-111 |
| CACGACG | 8070 | 0.0 | 50.888065 | 1 |
| AATCGCG | 4405 | 0.0 | 49.233807 | 106-107 |
| TCTTAGC | 37290 | 0.0 | 49.14221 | 5 |
| TTCACGA | 3765 | 0.0 | 49.02936 | 3 |
| CGAGCTC | 13605 | 0.0 | 48.647877 | 5 |