Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1002_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 31080150 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 526666 | 1.6945413712610782 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 96346 | 0.3099920688928464 | No Hit |
| GGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCT | 94365 | 0.3036182257807636 | No Hit |
| GTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTGTCGATGA | 63215 | 0.20339348426568082 | No Hit |
| GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 53429 | 0.1719071497402683 | No Hit |
| GGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGG | 43080 | 0.1386093696458994 | No Hit |
| GGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACA | 42783 | 0.13765377580224034 | No Hit |
| CAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGA | 39324 | 0.12652448588568588 | No Hit |
| CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 38747 | 0.12466799548908225 | No Hit |
| CGATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCC | 35406 | 0.11391836911984014 | No Hit |
| GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 33484 | 0.10773435778141355 | No Hit |
| GTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTG | 32615 | 0.1049383609795963 | No Hit |
| CCGATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGC | 32210 | 0.10363527846551576 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCTACG | 61685 | 0.0 | 107.99725 | 1 |
| TCTACGG | 63740 | 0.0 | 104.35958 | 2 |
| TACGGCC | 64390 | 0.0 | 103.14279 | 4 |
| CTACGGC | 67395 | 0.0 | 98.786575 | 3 |
| CGGCCAT | 68890 | 0.0 | 96.365074 | 6 |
| ACGGCCA | 70145 | 0.0 | 94.68854 | 5 |
| GGCCATA | 71075 | 0.0 | 93.442345 | 7 |
| GCCATAC | 70640 | 0.0 | 93.2214 | 8 |
| CCATACC | 72570 | 0.0 | 90.44437 | 9 |
| CGACTCT | 21885 | 0.0 | 57.84255 | 1 |
| TTAGCGG | 22970 | 0.0 | 53.071526 | 7 |
| GCGCGGT | 13075 | 0.0 | 51.91237 | 6 |
| CTTAGCG | 24415 | 0.0 | 50.00299 | 6 |
| TAGCCCC | 15775 | 0.0 | 48.843914 | 2 |
| GTAGCCC | 15815 | 0.0 | 48.646503 | 1 |
| AACGCGC | 71075 | 0.0 | 46.321243 | 22-23 |
| GAACGCG | 73845 | 0.0 | 45.90067 | 20-21 |
| TAGCGGT | 26800 | 0.0 | 45.333244 | 8 |
| CGTTCGA | 8480 | 0.0 | 45.18542 | 32-33 |
| CATACCA | 73945 | 0.0 | 44.784245 | 10-11 |