Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1011_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 27988897 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 279788 | 0.9996392498068073 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 132235 | 0.4724552025040501 | No Hit |
| GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT | 45778 | 0.16355771361765345 | No Hit |
| AAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAA | 43821 | 0.15656565530252942 | No Hit |
| AGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGAT | 37748 | 0.13486776560005206 | No Hit |
| GGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCT | 32826 | 0.11728222087494194 | No Hit |
| ATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGG | 28861 | 0.10311588913275145 | No Hit |
| GGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGAGAAG | 28809 | 0.10293010117547684 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCTACG | 38020 | 0.0 | 109.87183 | 1 |
| TCTACGG | 39525 | 0.0 | 105.51088 | 2 |
| TACGGCC | 39870 | 0.0 | 103.87995 | 4 |
| CTACGGC | 40110 | 0.0 | 103.82638 | 3 |
| CGGCCAT | 41670 | 0.0 | 99.07756 | 6 |
| ACGGCCA | 43860 | 0.0 | 94.21507 | 5 |
| GCCATAC | 43995 | 0.0 | 93.53458 | 8 |
| GGCCATA | 46560 | 0.0 | 88.784615 | 7 |
| CCATACC | 49140 | 0.0 | 83.42049 | 9 |
| CTTAGCG | 31665 | 0.0 | 59.730976 | 6 |
| TTAGCGG | 31610 | 0.0 | 59.428265 | 7 |
| AGCGGTG | 32580 | 0.0 | 56.725708 | 9 |
| CACGACG | 8055 | 0.0 | 54.391056 | 1 |
| TCGCGTA | 4485 | 0.0 | 53.16284 | 108-109 |
| GCGAGCT | 13625 | 0.0 | 52.3493 | 4 |
| TAGCGGT | 35815 | 0.0 | 52.0749 | 8 |
| CGCGTAT | 4705 | 0.0 | 51.569542 | 110-111 |
| TCTTAGC | 38935 | 0.0 | 48.895416 | 5 |
| ACGCCGT | 5685 | 0.0 | 48.42314 | 110-111 |
| TAGTCGA | 5405 | 0.0 | 48.270298 | 108-109 |