Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1009_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 20462961 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 627060 | 3.064365904817001 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 144154 | 0.7044630540027906 | No Hit |
| GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT | 49341 | 0.2411234620444226 | No Hit |
| CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 44261 | 0.21629812029647127 | No Hit |
| GTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTGTCGATGA | 30234 | 0.14774987842668516 | No Hit |
| GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 28143 | 0.13753141590799103 | No Hit |
| GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCA | 21127 | 0.10324507777735588 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCTACG | 85270 | 0.0 | 110.51482 | 1 |
| TCTACGG | 85705 | 0.0 | 109.49041 | 2 |
| CTACGGC | 86460 | 0.0 | 108.54105 | 3 |
| TACGGCC | 86655 | 0.0 | 107.80471 | 4 |
| ACGGCCA | 87800 | 0.0 | 106.13908 | 5 |
| GCCATAC | 89360 | 0.0 | 103.55397 | 8 |
| CGGCCAT | 90805 | 0.0 | 102.53306 | 6 |
| GGCCATA | 91810 | 0.0 | 101.62015 | 7 |
| CCATACC | 91950 | 0.0 | 100.37031 | 9 |
| GATCGAT | 8205 | 0.0 | 85.57648 | 1 |
| CGACTCT | 28355 | 0.0 | 76.987816 | 1 |
| ATCGATG | 9215 | 0.0 | 76.323746 | 2 |
| GCGACCT | 17400 | 0.0 | 67.58076 | 2 |
| TGGTCCG | 5465 | 0.0 | 66.59267 | 4 |
| GCGCGGT | 6245 | 0.0 | 65.56894 | 6 |
| TTAGCGG | 33070 | 0.0 | 64.295074 | 7 |
| TAGCGGT | 33825 | 0.0 | 62.495773 | 8 |
| CTTAGCG | 34500 | 0.0 | 62.273785 | 6 |
| AGCGGTG | 34040 | 0.0 | 61.672054 | 9 |
| GGTCCGA | 5905 | 0.0 | 61.531563 | 5 |