Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1010_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 11357451 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 475715 | 4.188571889942558 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 75364 | 0.6635643860581041 | No Hit |
| CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 29744 | 0.2618897497334569 | No Hit |
| GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT | 23896 | 0.2103993228762334 | No Hit |
| CCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGT | 23496 | 0.2068774058545355 | No Hit |
| GTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTGTCGATGA | 18029 | 0.15874160496047923 | No Hit |
| GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCA | 15409 | 0.1356730484683579 | No Hit |
| GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 15035 | 0.13238005605307038 | No Hit |
| GAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATGCCGTCTT | 13284 | 0.11696286429058775 | TruSeq Adapter, Index 6 (96% over 28bp) |
| TCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAG | 13005 | 0.11450632716795345 | No Hit |
| CGGCGGGGGACCGTCCCCCGACCGGCGACCGGCCGCCGCCGGGCGCATTT | 12345 | 0.10869516408215188 | No Hit |
| GATCGATGATGACTTCCATATATACATTCCTTGGAAAGCTGAACAAAATG | 12120 | 0.10671408575744681 | No Hit |
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA | 11429 | 0.10062997410246366 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTACGG | 68490 | 0.0 | 110.52126 | 2 |
| CTACGGC | 68520 | 0.0 | 110.43025 | 3 |
| TACGGCC | 69010 | 0.0 | 109.4176 | 4 |
| GTCTACG | 69720 | 0.0 | 109.1831 | 1 |
| CGGCCAT | 69395 | 0.0 | 108.19032 | 6 |
| ACGGCCA | 69950 | 0.0 | 107.537544 | 5 |
| GCCATAC | 70240 | 0.0 | 106.20218 | 8 |
| GGCCATA | 71580 | 0.0 | 105.033295 | 7 |
| CCATACC | 72025 | 0.0 | 103.6026 | 9 |
| GATCGAT | 9290 | 0.0 | 93.62979 | 1 |
| ATCGATG | 9995 | 0.0 | 86.73335 | 2 |
| CGGTTCA | 4650 | 0.0 | 76.12981 | 2 |
| TGGTCCG | 3635 | 0.0 | 71.67464 | 4 |
| CGATGAT | 13490 | 0.0 | 68.54946 | 4 |
| GCGACCT | 13330 | 0.0 | 67.53168 | 2 |
| CGACTCT | 18235 | 0.0 | 66.47333 | 1 |
| GTAGCCC | 5150 | 0.0 | 65.90281 | 1 |
| GTGCTCG | 2930 | 0.0 | 64.597015 | 1 |
| GTTCACG | 2400 | 0.0 | 62.554268 | 2 |
| TTAGCGG | 19460 | 0.0 | 60.813915 | 7 |