Basic Statistics
| Measure | Value |
|---|---|
| Filename | P1234_1016_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 28242306 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 123 |
| %GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 237774 | 0.8419071728774554 | No Hit |
| CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 51019 | 0.1806474301354854 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCTACG | 35840 | 0.0 | 110.24946 | 1 |
| TCTACGG | 37200 | 0.0 | 105.889046 | 2 |
| TACGGCC | 37750 | 0.0 | 103.43329 | 4 |
| CTACGGC | 38235 | 0.0 | 102.96158 | 3 |
| CGGCCAT | 38710 | 0.0 | 100.39412 | 6 |
| ACGGCCA | 40705 | 0.0 | 95.62244 | 5 |
| GCCATAC | 41480 | 0.0 | 93.08072 | 8 |
| GGCCATA | 45485 | 0.0 | 85.85059 | 7 |
| CCATACC | 45375 | 0.0 | 84.71733 | 9 |
| CACGACG | 10570 | 0.0 | 54.824856 | 1 |
| TATCGCG | 4790 | 0.0 | 51.710396 | 106-107 |
| CGCGTAT | 4910 | 0.0 | 51.484806 | 110-111 |
| CGCGAAT | 6250 | 0.0 | 51.276913 | 110-111 |
| TCGCGTA | 4915 | 0.0 | 50.700016 | 108-109 |
| GTCGTAT | 10380 | 0.0 | 50.323086 | 110-111 |
| AGTCGCG | 6380 | 0.0 | 50.13701 | 106-107 |
| ATCGCGT | 5055 | 0.0 | 49.29586 | 108-109 |
| ACGCCGT | 6075 | 0.0 | 48.612595 | 110-111 |
| CGTATCG | 5020 | 0.0 | 48.583176 | 104-105 |
| ATCCCGT | 12025 | 0.0 | 47.722004 | 108-109 |